[ensembl-dev] Core API problem - get_all_DBEntries

Pablo Marin-Garcia pg4 at sanger.ac.uk
Fri Jan 21 19:39:17 GMT 2011


Hello Glenn

> We're also adding more intuitive aliases for get_all_DBLinks() and
> get_all_DBEntries() in release 61 (due in few weeks).

are going to be updated the docs in the web with the alias for dblinks?
http://www.ensembl.org/info/docs/api/core/core_tutorial.html => external 
references

Would be nice to have also in this pages the sections with html anchors so it 
would be possible to answer basic questions with a line like
http://www.ensembl.org/info/docs/api/core/core_tutorial.html#external_references

and talking about this API tutorial, it would help the navigation to have a 
table of content at the top.

    -Pablo

>
> Glenn.
>
>
> On Fri, Jan 21, 2011 at 11:29 AM, Oliver, Gavin
> <gavin.oliver at almacgroup.com> wrote:
>> Hi,
>>
>>
>>
>> I am trying to use get_all_DBEntries with a wildcard.
>>
>>
>>
>> For example:
>>
>>
>>
>> my @dbentries = @{$gene->get_all_DBEntries(“HGNC%”)};
>>
>>
>>
>>
>>
>> The problem is it seems to return nothing.  If I use an exact serach term
>> without wildcards it is fine however.
>>
>>
>>
>> Can someone advise?
>>
>>
>>
>> Gavin
>>
>>
>>
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-----

   Pablo Marin-Garcia


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