[ensembl-dev] DAS (newbie question) How to get exon sequences?

[Jonathan Warren]

Hi

The equivalent for ensembl would be http://www.ensembl.org/das/Homo_sapiens.GRCh37.reference/sequence?segment=19:50595746,50595866


On 18 Feb 2011, at 11:54, Thomas Juettemann wrote:

> Hello all,
>
> I'd like to use DAS (or BioMart Perl API if DAS does not work) to
> retreive exon sequences for a genomic range. When using the UCSC DAS
> service, my query looked like this:
>
> wget 'http://genome.ucsc.edu/cgi-bin/das/hg19/dna?segment=19:50595746,50595866'
> -q -O das.txt
>
> but I failed to create the same for Ensembl.
>
> Any pointers welcome!
>
> Best wishes,
> Thomas
>
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Jonathan Warren
Senior Developer and DAS coordinator
blog: http://biodasman.wordpress.com/
jw12 at sanger.ac.uk
Ext: 2314
Telephone: 01223 492314