[ensembl-dev] DAS (newbie question) How to get exon sequences?

Thomas Juettemann juettemann at gmail.com
Fri Feb 18 11:54:34 GMT 2011


Hello all,

I'd like to use DAS (or BioMart Perl API if DAS does not work) to
retreive exon sequences for a genomic range. When using the UCSC DAS
service, my query looked like this:

 wget 'http://genome.ucsc.edu/cgi-bin/das/hg19/dna?segment=19:50595746,50595866'
-q -O das.txt

but I failed to create the same for Ensembl.

Any pointers welcome!

Best wishes,
Thomas




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