[ensembl-dev] Bad data in MySQL dumps

[Nathan Johnson]

Hi Fedor

Can you be more specific when you say 'fails to unpack'? What happens exactly? 

I suspect what you are seeing is that it is taking a long time to unpack as these files are particularly large.  Also, please see the README file for more information on how to handle the result_feature imports, as they require some non-standard parameters to handle the BLOB data.

Thanks


Nath

On 3 Apr 2011, at 12:14, Fedor Gusev wrote:

> Hello everyone.
> 
> I have some problems with file
>  ftp://ftp.ensembl.org/pub/release-61/mysql/homo_sapiens_funcgen_61_37f/result_feature.txt.gz
> 
> It is not present in CHECKSUMS file and fails to unpack. Can you
> please check on this?
> 
> -- 
> Kind regards,
> Fedor Gusev.
> 
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Nathan Johnson
Senior Scientific Programmer
Ensembl Regulation
European Bioinformatics Institute
Wellcome Trust Genome Campus
Hinxton
Cambridge CB10 1SD

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