[ensembl-dev] installing perl api and its dependency on bioperl

Chris Fields cjfields at illinois.edu
Thu Oct 28 17:34:39 BST 2010


Anyone know specifically what that dependency is?  I can start possibly looking at it from the BioPerl end.

chris

On Oct 28, 2010, at 11:07 AM, Will Spooner wrote:

> The latest bioperl version works fine with the Ensembl APIs. There is one remaining dependancy on BioPerl 1.2.3 in the Ensembl code, specifically the BlastView result parsing.
> 
> Will
> 
> On 28 Oct 2010, at 13:57, Andrea Edwards wrote:
> 
>> Hi
>> 
>> Just a quick question - on the installation instructions for ensembl perl api it says to install bioperl 1.2.3. Does it have to be that specific version of bioperl or anything later than that?
>> 
>> thanks
>> 
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> 
> --
> William Spooner
> whs at eaglegenomics.com
> http://www.eaglegenomics.com
> 
> 
> 
> 
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