[ensembl-dev] Genetree view

[Will Spooner]

Hi Sebastien, Balazs,

The file that you need to look at (having checked ensembl-website out of the Ensembl CVS) is;
  modules/EnsEMBL/Web/Component/Gene/ComparaTree.pm 

See, in particular, the 'content' method.

I'm not sure how easy it will be to separate the image generation code from the rest; I've never tried.

All the best,

Will

On 13 Oct 2010, at 07:51, Sébastien Moretti wrote:

> Hi
> 
> I am also interesting by this topic.
> I have ensembl data and want to localize the Gene Tree image tool into the API.
> 
> The fastest way to get the tool integrated into my web site could be to use the whole ensembl web code. But I am only interested by compara gene families.
> So I want tools related to compara without extra code and extra administrative tasks to maintain it.
> 
> Regards
> 
>> Hi,
>> 
>> I'm a beginner developer and I want to integrate the gene tree view provided by Ensembl in our website.
>> 
>> Where could I find (in the ensembl API) the files containing the code used for drawing the tree (ie. for generating the image and the HTML map) ?
>> 
>> 
>> Thanks in advance,
>> 
>> 
>> Balazs Laurenczy
> 
> -- 
> Sébastien Moretti
> Department of Ecology and Evolution,
> Biophore, University of Lausanne,
> CH-1015 Lausanne, Switzerland
> Tel.: +41 (21) 692 4221/4079
> http://bioinfo.unil.ch/
> 
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--
William Spooner
whs at eaglegenomics.com
http://www.eaglegenomics.com