[ensembl-dev] repeatmasker version information of the masked genome sequences
Pengcheng Yang
pengchy at gmail.com
Thu Dec 16 01:47:20 GMT 2010
Hi Andy,
Thanks for your reply.
Is there a summary file, in GFF format, of the repeats in the genome
sequences? From the summary GFF files, we can get the statistics that
how many are every kind of repeats.
Regards,
Pengcheng
On 2010-12-15 0:22, Andy Yates wrote:
> Dear Pengcheng,
>
> Much like UCSC we in EnsemblGenomes use the latest version of RepeatMasker (open-3.2.9).
>
> Regards,
>
> Andy
>
> On 14 Dec 2010, at 16:16, Pengcheng Yang wrote:
>
>> Hi,
>>
>> I can not find the RepeatMasker Version information in the ensemblgenomes.org, as UCSC Genome Browser supplied http://genome.ucsc.edu/FAQ/FAQdownloads.html#download16.
>>
>> Thanks,
>>
>> Pengcheng
>>
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