[ensembl-dev] where to find Bio::EnsEMBL::Pipeline::RunnableI?

jfchen at genetics.ac.cn jfchen at genetics.ac.cn
Thu Dec 9 14:10:28 GMT 2010


Hi Vogel,

Thank you. I have read the module. It is exactly the one I am looking for. 
This module was used by another module in gramene gene builder. The new 
Runnable module can do similar work. But I need to know the differences and 
modify the scripts that I need to use.
Have a nice day.

Sincerely,
Jinfeng

--------------------------------------------------
From: "Jan-hinnerk Vogel" <jhv at sanger.ac.uk>
Sent: Thursday, December 09, 2010 9:43 PM
To: "Chen Jinfeng" <jfchen at genetics.ac.cn>
Cc: <dev at ensembl.org>
Subject: Re: [ensembl-dev] where to find Bio::EnsEMBL::Pipeline::RunnableI?

>
> Hello Chen,
>
> I looked a bit deeper into it - the module has been removed from CVS  on 
> 29 May 2008.
>
> See :
>
> http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/ensembl-pipeline/modules/Bio/EnsEMBL/Pipeline/RunnableI.pm?hideattic=0&revision=1.60&root=ensembl&view=markup
>
> or
>
> http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/ensembl-pipeline/modules/Bio/EnsEMBL/Pipeline/?root=ensembl&hideattic=0
>
> I can't give you a specific branch to check out for the pipeline code  as 
> it's not branched. However, you can retrieve
> checkouts from a certain date with the -D option
>
> cvs co -D 2008-05-29
>
> Where did you see a code reference to the RunnableI.pm ?
>
>
> Hth,
>                  Jan-Hinnerk Vogel
>
>
>
>
> On 9 Dec 2010, at 09:07, Chen Jinfeng wrote:
>
>> Hi All,
>>
>> Does any one keep this modules "Bio::EnsEMBL::Pipeline::RunnableI"?  Or 
>> know where to find it. Thanks!
>>
>> Jinfeng Chen
>> _______________________________________________
>> Dev mailing list
>> Dev at ensembl.org
>> http://lists.ensembl.org/mailman/listinfo/dev
>
>
>
> --
> Ensembl Genebuild Team Project Leader
> www.ensembl.org
>
>
>
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> 





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