[ensembl-dev] REl 59 download issues: homo_sapiens_funcgen_59_37d drosophila_melanogaster_funcgen_59_525a mus_musculus_funcgen_59_37l

[jorge zamora]

Hi,

thanks for that Stephen.

Jorge


On Thu, 2010-08-12 at 10:44 +0100, Stephen Trevanion wrote:
> Dear Volker,
> 
> These were removed from the FTP site yesterday
> 
> Regards,
> 
> Steve
> 
> On 08/12/10 10:37, volker.weinberger at novartis.com wrote:
> >
> > Dear Nathan,
> >
> > it appears that the same issue is again present in Release 59, this 
> > time spotted in homo_sapiens_funcgen_59_37d, 
> > drosophila_melanogaster_funcgen_59_525a, and 
> > mus_musculus_funcgen_59_37l, which contain files like
> >
> > ./mus_musculus_funcgen_59_37l/annotated_feature_view.txt.gz
> > ./mus_musculus_funcgen_59_37l/cs_sr_view.txt.gz
> > ./mus_musculus_funcgen_59_37l/external_feature_ox_view.txt.gz
> > ./mus_musculus_funcgen_59_37l/external_feature_view.txt.gz
> > ./mus_musculus_funcgen_59_37l/feature_set_view.txt.gz
> > ./mus_musculus_funcgen_59_37l/fs_displayable_view.txt.gz
> > ./mus_musculus_funcgen_59_37l/regulatory_feature_view.txt.gz
> >
> > Please drop.
> >
> > Thanks,
> >
> > Volker
> >
> >
> >
> >
> >
> > *Nathan Johnson <njohnson at ebi.ac.uk>*
> > Sent by: owner-ensembl-dev at ebi.ac.uk
> >
> > 07.06.2010 12:39
> > Please respond to
> > ensembl-dev at ebi.ac.uk
> >
> >
> > 	
> > To
> > 	ensembl-dev at ebi.ac.uk
> > cc
> > 	
> > Subject
> > 	Re: [ensembl-dev]REl 58 download issues: snp_mart_58.sql
> >
> >
> >
> > 	
> >
> >
> >
> >
> >
> > Hi Volker
> >
> > wrt the 'view' tables in the eFG DB.  These are a by product of our 
> > mart build process and should have been removed prior to release. 
> >  They must have slipped through our healthchecks somehow. They can be 
> > dropped.
> >
> > Thanks
> >
> > Nath
> >
> > On 7 Jun 2010, at 10:58, volker.weinberger at novartis.com wrote:
> >
> > >
> > > Hi,
> > >
> > > could you please verify the following files from the data download 
> > area:
> > >
> > > - snp_mart_58.sql.gz:    which currently defines only a single table
> > > - drosophila_melanogaster_funcgen_58_513b.sql.gz  :  some table 
> > definitions may be missing, i.e. there are more data files (a number 
> > of files named *view*) than table definitons.
> > >
> > > Thanks,
> > > Volker
> > > _________________________
> > >
> > > CONFIDENTIALITY NOTICE
> > >
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> >
> > Nathan Johnson
> > Scientific Programmer
> > European Bioinformatics Institute
> > Wellcome Trust Genome Campus
> > Hinxton
> > Cambridge CB10 1SD
> > Email: njohnson at ebi.ac.uk
> > TelNo: (+44)1223 492629
> >
> >
> >
> >
> >
> >
> >
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> >
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> > the exclusive use of the individual or entity named above and may 
> > contain information that is privileged, confidential or exempt from 
> > disclosure under applicable law. If the reader of this message is not 
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