[ensembl-dev] Biomart

ANGELAKOPOULOS RAFAIL rangelak at uth.gr
Thu Oct 15 15:15:30 BST 2020


Hi to you all,
I'm trying to download sequences via BiomaRt and this kind of error  
rise every time.

Error: failed to load external entity  
"http://www.ensembl.org/info/website/archives/index.html?redirect=no"

Is the ensembl server down?

The code that i'm using is
library(biomaRt)
ensembl <- useEnsembl(biomart = "ensembl", dataset =  
"gaculeatus_gene_ensembl")
getSequence(id = "ENSGACG00000018991", type = "ensembl_gene_id",  
seqType = "cdna", mart = ensembl)

Is there something wrong?

Thank you,
Rafail Angelakopoulos





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