[ensembl-dev] mysql dump for GRCh37 v93

Thomas Maurel maurel at ebi.ac.uk
Mon Oct 15 17:02:12 BST 2018


Dear Bhavana,

Just to let you know that the release 94 GRCh37 MySQL dumps are now on the FTP site (ftp://ftp.ensembl.org/pub/grch37/release-94/mysql/ <ftp://ftp.ensembl.org/pub/grch37/release-94/mysql/>).
I am afraid that we are having issues getting the release 93 GRCh37 MySQL dumps to the FTP site so these won’t be available until tomorrow.

Apologies for any inconvenience caused.
Kind Regards,
Thomas

> On 15 Oct 2018, at 12:28, Marc Chakiachvili <mchakiachvili at ebi.ac.uk> wrote:
> 
> Hi dear Bhavana, thanks for warning us and sorry for the inconvenience.
> I am afraid files have been generated, but not copied in the right place. 
> We just started the copy, I'll let you know when data will be available.
> 
> BTW: we noticed the same issue with release 94, copy is ongoing for these ones.
> Marc
> Marc Chakiachvili
> Ensembl Production Project Leader - Genomics Technology Infrastructure
> 
> European Bioinformatics Institute (EMBL-EBI)
> European Molecular Biology Laboratory
> Wellcome Trust Genome Campus
> Hinxton
> Cambridge CB10 1SD
> United Kingdom
> On 15/10/18 09:38, Bhavana Harsha wrote:
>> Hello, 
>> 
>> I can’t seem to find the mysql/ folder for GRCh37 release 93:
>> 
>> ftp://ftp.ensembl.org/pub/grch37/release-93/ <ftp://ftp.ensembl.org/pub/grch37/release-93/>
>> 
>> Has this been moved somewhere?
>> 
>> 
>> Regards,
>> Bhavana
>> 
>> 
>> 
>> 
>> 
>> ---------------------------------------------
>> Bhavana Harsha
>> Senior Bioinformatician
>> COSMIC
>> Wellcome Trust Sanger Institute
>> Hinxton, UK
>> CB10 1SA
>> 
>> 
>> 
>> 
>> 
>> 
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--
Thomas Maurel
Bioinformatician - Ensembl Production Team
European Bioinformatics Institute (EMBL-EBI)
European Molecular Biology Laboratory
Wellcome Trust Genome Campus
Hinxton
Cambridge CB10 1SD
United Kingdom

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