[ensembl-dev] Using Ensembl API to access GRCh37 data

John M.C. Ma manchunjohn-ma at uiowa.edu
Mon Jul 9 18:26:31 BST 2018


Hi,

I noticed the GRCh37 site states "The API and website will be updated
in tandem with the release of the main Ensembl website (currently
version 92)[...]", but the API doc pages in the GRCh37 site
(http://grch37.ensembl.org/info/docs/api/core/core_tutorial.html) uses
identical content as its GRCh38 counterpart.

I'm sure accessing the GRCh37 database from the API only requires some
change to Bio::EnsEMBL::Registry::load_registry_from_db arguments. But
how?

Best regards,
John Ma, PhD
Postdoctoral Fellow
Department of Lymphoma/Myeloma
University of Texas MD Anderson Cancer Center
Houston, Texas, USA



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