[ensembl-dev] VEP ProteinSeq with Haplosaurus output

[Fong Chan]

Hi,

I was wondering if there a way to get the VEP plugin ProteinSeq.pm (https://github.com/Ensembl/VEP_plugins/blob/release/93/ProteinSeqs.pm) to work with Haplosaurus output (https://www.ensembl.org/info/docs/tools/vep/haplo/index.html). I am interested in producing mutated peptide sequences that incorporates the haplotypes.

Thanks,

Fong
This e-mail message contains confidential information intended only for the use of the individual or entity to which it is addressed. If you are not the intended recipient, please do not disseminate, distribute or copy this communication, by e-mail or otherwise. Instead, please notify us immediately by return e-mail and then delete and discard all copies of the e-mail. We have taken all reasonable precautions to check this e-mail and any attachments for viruses, but we cannot accept any liability for any damage sustained as a result of any virus, worm or other malicious software. Achilles Therapeutics Limited (10167668) is registered in England and Wales. The registered office is at Stevenage Bioscience Catalyst, Gunnels Wood Road, Stevenage SG1 2FX, UK.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20180815/2cd9323b/attachment.html>