[ensembl-dev] About Chr11 of human

[Matthew Laird]

Hello Kattina,

CHR_HSCHR11_1_CTG8 is an alternate scaffold in the reference genome. For 
regions of high variation in the population the GRCh38 contains a number 
of alternate loci to represent this. Whereas the gene you've found on 
chromosome 11 is the version of that gene on the primary assembly.

I hope that answers your question, please let us know if you need any 
further assistance.

On 27/11/17 18:30, Kattina Zavala wrote:
> Hi Ensembl team,
> I want to know the difference between Chr11 of human and Chromosome 
> CHR_HSCHR11_1_CTG8, because when search DRD4 gene, I have 2 gene 
> ensembl ID:
> ENSG00000276825 and ENSG00000069696.
>
> Thank you very much in advance,
>
> Kattina
> -- 
> Kattina Zavala
> Bioquímico
> Instituto de Cs. Ambientales y Evolutivas
> Universidad Austral de Chile
> Teléfono: +56 9 8279 4985
> ---------------------------------------
> *"Rescatar un animal no cambiará el mundo... *
> *pero para ese animal el mundo cambiará para siempre..."*
>
>
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-- 
Matthew Laird - Ensembl Core Developer
The European Bioinformatics Institute (EMBL-EBI)
Wellcome Genome Campus
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CB10 1SD, United Kingdom
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