[ensembl-dev] COSMIC annotations missing

Guillermo Marco Puche guillermo.marco at sistemasgenomicos.com
Fri Sep 16 12:37:26 BST 2016


Dear devs,

I'm aware of the COSMIC licensing changes. I'm trying to annotate a huge 
VCF with latest vep (85). I'm not getting any COSMIC annotation at all. 
The following two VCF variants have COSMIC annotations but I'm getting 
none with vep:

chr1    69224   .       A       C
chr1    69230   .       A       C

Has been COSMIC removed from Ensembl public annotations even if VCF 
headers shows COSMIC=77? I thought that the previous releases would stay 
in Ensembl.

Regards,
Guillermo
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