[ensembl-dev] BED file format on custom track
Anne Lyle
annelyle at ebi.ac.uk
Wed Oct 5 17:14:57 BST 2016
Hi Liam
Are you using Firefox (version 49) by any chance? We’ve seen some upload issues in this browser, so it could be related. If not, I’ll have a look at your file and see if there’s any reason why our parser isn’t reading it correctly.
Cheers
Anne
> On 5 Oct 2016, at 12:03, Liam Thompson <dejmail at gmail.com> wrote:
>
> Hi everyone
>
> I am trying to upload a Custom Track on the Ensembl browser. I have created a BED file in Python as per the examples given on the Ensembl page. I have also tested the formatting using the Bedops suite (gives no errors). It also uploads fine and displays on UCSC. The Ensembl uploader just says "File did not validate as format BED."
>
> Is there anything else I can check or change ?
>
> I have uploaded the file to http://textuploader.com/daval and I would be most appreciative if someone could take a look.
>
> Many thanks
>
> Liam Thompson
>
> Gothenburg, Sweden
>
>
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