[ensembl-dev] FASTA files in EnsemblGenomes

Wei, Xuehong weix at cshl.edu
Wed Nov 30 15:50:12 GMT 2016


Hi Dan,

This seems to be a systematic problem. We also found all the GFF3 gene dumps missing genes on top-level scaffolds.


Sharon

On Nov 30, 2016, at 3:32 AM, Andreu Paytuví <apaytuvi at sequentiabiotech.com<mailto:apaytuvi at sequentiabiotech.com>> wrote:

Hi Dan,

I can't find the toplevel version.

Andreu.

Andreu Paytuví
Bioinformatician & PhD candidate
[http://www.pcb.ub.edu/portal/delegate/ImageGetter?empresaId=ENT_006551]
Sequentia Biotech SL
www.sequentiabiotech.com<http://www.sequentiabiotech.com/>
Find Sequentia at LinkedIn<http://www.linkedin.com/company/sequentia-biotech>
Parc Cientific de Barcelona
C/Baldiri Reixac, 4-8
Torre R, 02 A6-A7
08028 Barcelona

This message is intended exclusively for its addressee and may contain information considered CONFIDENTIAL and protected by professional privilege. If you are not the intended recipient you are hereby notified that any dissemination, copy or disclosure of this communication is strictly prohibited by law. If this message has been mistakenly received, please immediately notify us via e-mail and delete it.

Este mensaje está dirigido exclusivamente a su destinatario y puede contener información privilegiada o CONFIDENCIAL. Si no es Vd. el destinatario indicado, queda notificado de que la utilización, divulgación y/o copia sin autorización está  prohibida en virtud de la legislación vigente. Si ha recibido este mensaje por error, le rogamos que nos lo comunique inmediatamente por esta misma vía y proceda a su eliminación.


On 29 November 2016 at 21:38, Dan Staines <dstaines at ebi.ac.uk<mailto:dstaines at ebi.ac.uk>> wrote:
Apologies, the files are now present - please let us know if you have any more problems.

Dan.

--
Dan Staines, PhD
Genomics Technology Infrastructure Coordinator
EMBL-EBI, Wellcome Trust Genome Campus
Cambridge CB10 1SD, UK
Tel: +44-(0)1223-492507<tel:%2B44-%280%291223-492507>

_______________________________________________
Dev mailing list    Dev at ensembl.org<mailto:Dev at ensembl.org>
Posting guidelines and subscribe/unsubscribe info: http://lists.ensembl.org/mailman/listinfo/dev
Ensembl Blog: http://www.ensembl.info/

_______________________________________________
Dev mailing list    Dev at ensembl.org<mailto:Dev at ensembl.org>
Posting guidelines and subscribe/unsubscribe info: http://lists.ensembl.org/mailman/listinfo/dev
Ensembl Blog: http://www.ensembl.info/



More information about the Dev mailing list