[ensembl-dev] Rest API lookup

[Herzig, David]

Hi Ensembl Team

I set up the ensembl database with several species. I also set up the REST
API. Everything works fine.

Now I have loaded custom species files into a new database (created the
schema, loaded sequences, loaded GFF, ...)

If I now go the the REST API on the address: GET info/species I can see my
new specie. Also if I connect to the database and check the tables gene,
transcript and exon, everything looks fine.

Now my issue: I have an entry in the gene table of my custom specie. The
gene has the stable_id :123456 (just some ID). If I go now to the REST API
and lookup for this id:

GET lookup/id/123456

I do not retrieve the gene. It seems like I have missed something.

Any ideas?

regads,
David

-- 
David Herzig
Scientific Application Developer
SIAD Solution Delivery & Architecture, pRED Informatics
Roche Pharma Research and Early Development
Roche Innovation Center Basel

F. Hoffmann-La Roche Ltd
Grenzacherstrasse 124
4070 Basel
Switzerland
Phone +41 61 687 31 70

Learn more about pRED Informatics at http://go.roche.com/*pREDi*
<http://go.roche.com/pREDi>
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