[ensembl-dev] Different LOFTEE Annotations by Standalone and ExAc
mikezhaow at gmail.com
Sun Mar 13 22:14:08 GMT 2016
I have some variant-transcript pairs and the LOFTEE annotations I got by
running it locally and checking ExAc website are different: ExAc reported
"high-confidence" while I got "LC". It seems to me that all of these
variants are related to splicing and I listed three examples below. Could
you please kindly take a look? Hope I didn't miss anything obvious. I was
running VEPv83 and downloaded LOFTEE on March 9th.
Thank you for you help.
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