[ensembl-dev] how to use Ensembl API to fetch data from an older release?
Tuo Zhang
taz2008 at med.cornell.edu
Mon Dec 5 18:29:20 GMT 2016
Dear support,
I was trying to use the most recent Ensembl Perl API to fetch data from an
older release 67 (NCBIM37 for mouse).
The current API gives me an error message when I used gvf2vcf.pl:
"MSG: Cannot request a slice whose start (148582227) is greater than
145441459 for 7."
I guess the error is due to accessing a wrong mouse genome assembly. Is
there a way I can force the API on a specific release?
Thanks a lot,
Tuo
--
Tuo Zhang, Ph.D.
Research Associate
Genomics Resources Core Facility
Weill Cornell Medical College
1300 York Ave. Rm. A-162
New York, NY 10021
Tel. 212-746-5076 (O)
taz2008 at med.cornell.edu
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