[ensembl-dev] 1000 genomes gvcf

[Will McLaren]

Hello,

We (Ensembl) do not have gVCF files for 1000 genomes individuals, and I
don't believe the 1000 Genomes team provides these either.

A quick google suggests that some have generated their own from the BAM
files [1] which are available from the 1000 Genomes FTP site [2].

Regards

Will McLaren
Ensembl Variation

[1] : https://www.biostars.org/p/196066/
[2] :
ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/data_collections/1000_genomes_project/data

On 20 August 2016 at 08:58, Genomeo Dev <genomeodev at gmail.com> wrote:

> Dear 1000 genomes/dev team,
>
> Is it possible to get hold of a gvcf file for at least a few individuals
> from 1000 genomes?
>
> --
> G.
>
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