[ensembl-dev] Get dbNSFP fields from VEP REST API?

Guillermo del Angel g.del.angel.s at gmail.com
Tue Apr 19 17:31:24 BST 2016


Hi everyone!
Is getting dbNSFP fields supported from the VEP RESTful API? I see that
there is an optional argument to specify which dbNSFP columns to get at
http://rest.ensembl.org/documentation/info/vep_hgvs_get

However, the following command doesn't seem to return the requested field:

curl 'http://rest.ensembl.org/vep/human/hgvs/ENST00000374840:c.571G>A?CSN=1;hgvs=1;canonical=1;ccds=1;domains=1;dbNSFP=LRT_pred'
  -H 'Content-type:application/json'

Enclosing the argument in double quotes doesn't make any difference.

Thanks,

Guillermo
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20160419/9366f288/attachment.html>


More information about the Dev mailing list