[ensembl-dev] Format of empty 'clinical_significance' in overlap REST service

Sarah Hunt seh at ebi.ac.uk
Mon Apr 11 11:10:34 BST 2016


Hi Mungo,

Thanks for reporting this - it will be fixed when we next restart the 
REST service.

Best wishes,

Sarah

On 11/04/2016 09:43, Mungo Carstairs (Staff) wrote:
>
> Hi Ensembl,
>
>
> When 'clinical_significance' is empty (e.g. in JSON format), the GFF 
> format has something like
>
> clinical_significance=ARRAY(0x98b48c0)
> should this just be omitted here?
>
> Example:
>
>
> http://rest.ensembl.org/overlap/id/ENSE00003587655?feature=exon&feature=variation&content-type=text/x-gff3
>
>
>
> Thanks,
>
>
> Mungo
>
>
> Mungo Carstairs
> Jalview Computational Scientist
> The Barton Group
> Division of Computational Biology
> School of Life Sciences
> University of Dundee, Dundee, Scotland, UK.
> www.jalview.org <http://www.jalview.org/>
> www.compbio.dundee.ac.uk <http://www.compbio.dundee.ac.uk/>
>
> The University of Dundee is a registered Scottish Charity, No: SC015096
>
>
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