[ensembl-dev] RegulatoryFeatures in VEP v79?
konradk at broadinstitute.org
Thu May 21 05:28:48 BST 2015
Hi Will, everyone,
Are RegulatoryFeature annotations expected to have the same results in VEP v79 (GRCh37) as previous versions (e.g. v77)? When annotating the ExAC VCF, the older versions included many ENSR* annotations, but v79's do not (same command including --everything both times). For instance, the following variant used to overlap ENSR00000528767 but does not seem to in my most recent version:
1 13372 . G C
Any idea why this might be happening? All other annotations seem fine.
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