[ensembl-dev] Rest

[Will McLaren]

Hi Igo,

The VEP endpoints should get you most of the information you are looking
for:

http://rest.ensembl.org/documentation/info/vep_region_get

An example:

http://rest.ensembl.org/vep/human/region/1:230710048-230710048/G?content-type=application/json

Note that we do not currently have frequency data from the ExAC project.

Regards

Will McLaren
Ensembl Variation

On 14 May 2015 at 04:02, Igo Medeiros <igo701 at gmail.com> wrote:

> With all informations like polyphen and sift tools. And ExacBrowser.
>
>
> 2015-05-13 23:00 GMT-03:00 Igo Medeiros <igo701 at gmail.com>:
>
> I would like to enter with chromossome and sequence (chr11:5246860) and
>> return to me prediction.
>>
>> 2015-05-13 12:42 GMT-03:00 mag <mr6 at ebi.ac.uk>:
>>
>>  Hi Igo,
>>>
>>> What type of information are you looking for?
>>>
>>> We have a user guide, available on:
>>> https://github.com/Ensembl/ensembl-rest/wiki
>>> It describes the general structure of the REST server and contains
>>> examples on how to write a client to retrieve data.
>>>
>>> The REST server itself has documentation for each endpoint, detailing
>>> what data can be retrieved as well as additional parameters available.
>>> See for example:
>>> http://rest.ensembl.org/documentation/info/overlap_id
>>>
>>> If you are interested in more detailed information on the underlying
>>> databases, the REST server is based on our Perl API and its MySQL schema
>>> This is documented on our main website, for example
>>> http://www.ensembl.org/info/docs/api/variation/variation_schema.html
>>> for the Variation schema
>>> or
>>> http://www.ensembl.org/info/docs/api/core/core_tutorial.html
>>> for information on some of the data provided.
>>>
>>> If this does not answer your question, please let us know in more detail
>>> what type of information your are looking for.
>>>
>>>
>>> Regards,
>>> Magali
>>>
>>>
>>> On 13/05/2015 15:20, Igo Medeiros wrote:
>>>
>>> Hi,
>>>
>>>
>>>  Is there somewhere I can access more information about your DB, apart
>>> from what is described in the documentation, using rest.ensembl.org?
>>>
>>>
>>>  Thank you,
>>>
>>>
>>> Igo Paixão de Medeiros
>>>
>>>
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>>>
>>
>>
>> --
>> Igo Paixão de Medeiros
>>
>
>
>
> --
> Igo Paixão de Medeiros
>
> _______________________________________________
> Dev mailing list    Dev at ensembl.org
> Posting guidelines and subscribe/unsubscribe info:
> http://lists.ensembl.org/mailman/listinfo/dev
> Ensembl Blog: http://www.ensembl.info/
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