[ensembl-dev] Question about annotation with Refseq cache - SYMBOL value

[Will McLaren]

Hi again,

This has been fixed with a patch to the variation API; if you re-run
INSTALL.pl to re-install the API, or do a git pull in your
ensembl-variation directory if you installed the API from GitHub, you
should get the fix.

Thanks again for the spot

Will

On 31 March 2015 at 09:44, Will McLaren <wm2 at ebi.ac.uk> wrote:

> Hello,
>
> It looks like there's an issue with the VEP where the gene symbol is
> missing for some genes when using the RefSeq cache.
>
> We are investigating this and will let you know when we have a solution.
>
> Thanks for bringing it to our attention
>
> Will McLaren
> Ensembl Variation
>
> On 31 March 2015 at 06:41, namchul ghim <chulghim at gmail.com> wrote:
>
>> How can i get  SYMBOL value ( csq section's 4th column) ??
>>
>> I must use refseq version cache.
>>
>>
>>
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