[ensembl-dev] VEP REST API and CNV

mag mr6 at ebi.ac.uk
Mon Jan 19 11:33:24 GMT 2015


Hi Stephen,

The following works for me and seems to return hgvs notations:
http://grch37.rest.ensembl.org/vep/human/id/rs116035550?content-type=application/json;hgvs=1

This will return entries with the following format:
"hgvsp":"ENSP00000325941.5:p.Glu340Lys"


Regards,
Magali

On 19/01/2015 11:28, Stephen Clayton wrote:
> On 19 Jan 2015, at 11:26, Stephen Clayton <sc13 at sanger.ac.uk> wrote:
>
>> Dear dev at ensembl,
>> As Will is away, please could you help with this urgent but hopefully trivial bug fix.
>>
>>
>>
>> On 19 Jan 2015, at 11:23, Stephen Clayton <sc13 at sanger.ac.uk> wrote:
>>
>>> Dear Will,
>>> Please could you let me know if its possible for the VEP rest API to output hgvs codes ?
>>> (Ideally in the next day or so, otherwise I will work around this)
>>> Currently there is a :hgvs key returned in the response but I think its always nil.
>>>
>>> http://grch37.rest.ensembl.org/vep/human/region/
>>>
>>> (We need grch37)
>>>
>>> Thank you,
>>> Stephen
>>>
>
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