[ensembl-dev] Organellar genomes
Sam Seaver
samseaver at gmail.com
Sun Aug 16 07:04:44 BST 2015
I was browsing a few plant assembly pages such as this one:
http://plants.ensembl.org/Hordeum_vulgare/Info/Annotation/#assembly
Currently, the easiest way for me to find out whether a genome includes
either the mitochondrial or plastidial genome is to search the assembly
page for keywords such as 'plast' or 'mito'. In this manner, I can tell
that the plastid genome for Barley has been include, but the mitochondrial
genome hasn't (I'm not even sure if I can take the lack of information to
be a reliable indicator of the fact). Rice doesn't mention either, Wheat
mentions both, and so on.
Is it possible that a single page or set of statistics could be released
that gives one a definitive indication as to whether the genome for each
species also includes the plastid or mitochondrial genomes?
Thanks
Sam
--
Asst. Computational Scientist
Mathematics and Computer Science Division
Biosciences Division
Argonne National Laboratory
9700 S. Cass Avenue
Argonne, IL 60439
http://www.linkedin.com/pub/sam-seaver/0/412/168
samseaver at gmail.com
(773) 796-7144
"We shall not cease from exploration
And the end of all our exploring
Will be to arrive where we started
And know the place for the first time."
--T. S. Eliot
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