[ensembl-dev] Retrive dN/dS values between orthologs of Zebrafish and Cave fish

Liu Jialin Jialin.Liu at unil.ch
Tue Apr 21 09:24:47 BST 2015


Ok, many thanks.

Jialin
________________________________________
From: dev-bounces at ensembl.org <dev-bounces at ensembl.org> on behalf of Matthieu Muffato <muffato at ebi.ac.uk>
Sent: Tuesday, April 21, 2015 10:10 AM
To: Ensembl developers list
Subject: Re: [ensembl-dev] Retrive dN/dS values between orthologs of Zebrafish and Cave fish

Dear Jialin,

We only compute dN/dS values between closely-related species: among
fish, we only do fugu vs tetraodon.
dN/dS are thus absent from the database / BioMart / website

Matthieu

On 20/04/15 20:45, Liu Jialin wrote:
> Dear list,
>
>
> I want retrive dN/dS values between orthologs of Zebrafish and Cave fish
> using Ensembl website interface. However, there  isn't dN/dS
> values between Zebrafish and Cave fish(see picture). So, I'm wondering
> is this accessible from the perl API?
>
>
> [Screen Shot 2015-04-20 at 20.06.12.png]
>
>
> Cheers,
>
> Jialin
>

_______________________________________________
Dev mailing list    Dev at ensembl.org
Posting guidelines and subscribe/unsubscribe info: http://lists.ensembl.org/mailman/listinfo/dev
Ensembl Blog: http://www.ensembl.info/



More information about the Dev mailing list