[ensembl-dev] Can't locate object method "fetch_by_Member_id_Member_id

Liu Jialin Jialin.Liu at unil.ch
Wed Apr 8 14:38:30 BST 2015


Dear list,


I am wondering what's the new method for replacing fetch_by_Member_id_Member_id?

Because I got a mistake like this: Can't locate object method "fetch_by_Member_id_Member_id".

By the way, did the methods  get_SimpleAlign()and percentage_identity()also have changed?

My script as below.

Thanks a lot for your help.?


Regards,

Jialin


my $homology = $homology_adaptor->fetch_by_Member_id_Member_id($gene1, $gene2)->[1]

my $simple_align = $homology->get_SimpleAlign();

print "\tIdentity: ", $simple_align->percentage_identity() ,"%\n";
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