[ensembl-dev] REST server replies with "assembly_name":"GRCh38" with other species than human

Paolo Cozzi paolo.cozzi at itb.cnr.it
Mon Oct 13 14:28:04 BST 2014


Dear all,

Using REST server with other species than human, I found always 
"assembly_name":"GRCh38", for example:

$ curl -H "content-type:application/json" -H "accept:application/json" 
--data '{ "variants" : ["21 26960070 rs116645811 G A . . .", "21 
26965148 rs1135638 G A . . ." ] }' http://rest.ensembl.org/vep/cow/region

[{"input":"21 26960070 rs116645811 G A . . 
.","assembly_name":"GRCh38","end":26960070,"seq_region_name":"21","transcript_consequences":[{"gene_id":"ENSBTAG00000012351","variant_allele":"A","biotype":"protein_coding","gene_symbol_source":"EntrezGene","consequence_terms":["intron_variant"],"strand":1,"gene_symbol":"ARNT2","transcript_id":"ENSBTAT00000016391"}],"strand":1,"id":"rs116645811","allele_string":"G/A","most_severe_consequence":"intron_variant","start":26960070}, 
...

Could be possible to fix assembly name?

Thank you for your support,

Regards,

Paolo

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20141013/c02ea48d/attachment.html>


More information about the Dev mailing list