[ensembl-dev] REST server replies with "assembly_name":"GRCh38" with other species than human
Paolo Cozzi
paolo.cozzi at itb.cnr.it
Mon Oct 13 14:28:04 BST 2014
Dear all,
Using REST server with other species than human, I found always
"assembly_name":"GRCh38", for example:
$ curl -H "content-type:application/json" -H "accept:application/json"
--data '{ "variants" : ["21 26960070 rs116645811 G A . . .", "21
26965148 rs1135638 G A . . ." ] }' http://rest.ensembl.org/vep/cow/region
[{"input":"21 26960070 rs116645811 G A . .
.","assembly_name":"GRCh38","end":26960070,"seq_region_name":"21","transcript_consequences":[{"gene_id":"ENSBTAG00000012351","variant_allele":"A","biotype":"protein_coding","gene_symbol_source":"EntrezGene","consequence_terms":["intron_variant"],"strand":1,"gene_symbol":"ARNT2","transcript_id":"ENSBTAT00000016391"}],"strand":1,"id":"rs116645811","allele_string":"G/A","most_severe_consequence":"intron_variant","start":26960070},
...
Could be possible to fix assembly name?
Thank you for your support,
Regards,
Paolo
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