[ensembl-dev] REST server 3.0 vep endopoint works only with human specie
Paolo Cozzi
paolo.cozzi at itb.cnr.it
Tue Jul 22 11:55:37 BST 2014
Dear developer,
I found an odd response from the vep/:species/region/
<http://rest.ensembl.org/documentation/info/vep_region_post> of the new
ensembl REST server ( http://rest.ensembl.org/) while searching for
species other than human. For example, if I do 2 POST request with curl
on human and cow (the sample data are the same as in the VEP webserver):
$ curl -H "content-type:application/json" -H "accept:application/json"
--data '{ "variants" : ["1 909238 909238 G/C +", "3 361464 361464
A/- +", "5 121187650 121188519 DUP"] }'
http://rest.ensembl.org/vep/human/region > output_human.txt
$ curl -H "content-type:application/json" -H "accept:application/json"
--data '{ "variants" : ["1 909238 909238 G/C +", "3 361464 361464
A/- +", "5 121187650 121188519 DUP"] }'
http://rest.ensembl.org/vep/cow/region > output_cow.txt
I will find the same results (diff give me no output), even VEP gives me
2 different results. Could be a problem of variation endpoint?
Thanks for your support,
best regards,
Paolo.
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