[ensembl-dev] Loading GFF3 (C. elegans) into Ensembl schema?

Michael Paulini mh6 at sanger.ac.uk
Mon Feb 24 12:24:05 GMT 2014


On 24/02/14 11:32, Paul Linehan wrote:
> Hi again all,
>
> On futher investigation, maybe I should be looking at the data in the annotated
> sequence files (EMBL or GenBank)
>
> available here
>
> http://www.ensembl.org/info/data/ftp/index.html
>
>
> Paul...
>
>
just to be controversial:
Why don't you grab the SQL database itself? I do believe the dumps are
on the FTP server.
And if you just want the gene-models without anything else (as you would
get from DDBJ), I can also provide a trimmed down version.

M




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