[ensembl-dev] Variant Tissue information

[Guillermo Marco Puche]

Hello Will,

Thank you for information. I'll take a look deeper at those features.

On 02/13/2014 01:08 PM, Will McLaren wrote:
> Hi Guillermo
>
> Ensembl Variation does not have any tissue-specific information 
> available I'm afraid.
>
> The Core database offers tissue-specific RNASeq data, while the 
> Regulation database carries cell-specific regulatory features (which 
> you can access using --cell_type in the VEP). You might like to 
> investigate these further to see if they might help you.
>
> Regards
>
> Will McLaren
> Ensembl Variation
>
>
> On 10 February 2014 09:37, Guillermo Marco Puche 
> <guillermo.marco at sistemasgenomicos.com 
> <mailto:guillermo.marco at sistemasgenomicos.com>> wrote:
>
>     Hello,
>
>     I'm looking for tissue information for variants. I would like to
>     know if it's possible to extract this information from Ensembl
>     variation DB schema so I can write a VEP plugin to output this
>     information.
>
>     Thank you !
>     -- 
>

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