[ensembl-dev] Ensembl 78 is out!

[Hiram Clawson]

Good Morning Ensembl Fans:

I'm looking at this v78 release and I'm puzzled by a missing set of files
that I used to find in these releases.  It appears that mysql database dumps
with names previous to gadus_morhua have failed to happen.  Please note the
name pattern at:
   ftp://ftp.ensembl.org/pub/release-78/mysql/

Compare to the full set of assembly names for example at:
   ftp://ftp.ensembl.org/pub/release-78/fasta/

--Hiram

On 12/3/14 9:16 AM, Amonida Zadissa wrote:
> Hi all,
>
> We are pleased to announce that the latest Ensembl update (e!78) has been released:
> http://www.ensembl.org/
>
> Highlights include:
>
> * Instant VEP: immediate answers for a single variant (All species)
> * Mouse: genes updated to GENCODE M4, and new assembly patches (GRCm38.p3).
> * Transcript Support Levels (TSLs), APPRIS principal isoforms and GENCODE basic annotations are
> now accessible through Ensembl BioMart (Human, mouse, rat and zebrafish).
> * Find Gene Alleles across patches and haplotypes (Human)
> * Interactive species tree (All species)
> * Improved Gene Tree export (All species)
> * Updated pig HAVANA annotation in Vega
> * Updated C. elegans annotation (WS245)
> * Updated data from the Animal QTL database for chicken, cow, horse, pig and sheep.
> * RNASeq data can now be displayed as BigWig tracks, which will enable faster rendering of
> these data.
>
> A complete list of the changes can be found on http://www.ensembl.org/info/website/news.html.
>
> Also, for the latest news from the Ensembl project visit our blog at http://www.ensembl.info
>
> The Ensembl Release Webinar e78 is planned for Wednesday, 17 Dec 4-4:30 GMT. Registration is
> free!): http://tinyurl.com/e78-webinar.
>
> Best regards,
> Amonida
>
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