[ensembl-dev] Mirroring Ensembl Website

Naveen G naveeng at utexas.edu
Fri Nov 15 16:56:15 GMT 2013


Hi Anne,

Thanks for sharing that information.
By the way as mentioned before, I am not finding the mod_headers.so file
under /ensembl/apache2/modules. Could you please tell me if I am using the
correct apache and mod_perl versions? I used the ones mentioned in the
tutorial. But that doesn't work.

Regards,
Naveen.


On Fri, Nov 15, 2013 at 2:35 AM, Anne Parker <ap5 at sanger.ac.uk> wrote:

> Hi Naveen
>
> You need to start the server using the supplied script, e.g. from your
> installation folder, type
>
> ./ctrl-scripts/start_server
>
> I’m currently updating the documentation and will make sure that this is
> clear in future.
>
> Cheers
>
> Anne
>
>
> On 14 Nov 2013, at 16:50, Naveen G <naveeng at utexas.edu> wrote:
>
> Thanks for helping me out with this.
> Yes, I follow the instructions given in this tutorial.
>
> http://useast.ensembl.org/info/docs/webcode/mirror/install/non-ensembl-code.html#apache
> I downloaded httpd-2.2.4 and tried mod_perl versions 2.0.3,2.0.7,2.0.8.
> I tried to start the server with the command "/my_path/apache/bin/httpd -d
> /my_path/ensembl". Also I don't find the module mod_headers.so under my
> apache directory after installing mod_perl. Not sure what I am missing
> here. Requesting your assistance.
>
>
> On Thu, Nov 14, 2013 at 10:49 AM, Naveen G <naveen15101989 at gmail.com>wrote:
>
>> Hi Anne,
>>
>> Thanks for helping me out with this.
>> Yes, I follow the instructions given in this tutorial.
>>
>> http://useast.ensembl.org/info/docs/webcode/mirror/install/non-ensembl-code.html#apache
>> I downloaded httpd-2.2.4 and tried mod_perl versions 2.0.3,2.0.7,2.0.8.
>> I tried to start the server with the command "/my_path/apache/bin/httpd
>> -d /my_path/ensembl". Also I don't find the module mod_headers.so under my
>> apache directory after installing mod_perl. Not sure what I am missing
>> here. Requesting your assistance.
>>
>> Thanks,
>> Naveen.
>>
>>
>> On Mon, Nov 11, 2013 at 9:46 AM, Anne Parker <ap5 at sanger.ac.uk> wrote:
>>
>>> Hi Naveen
>>>
>>> It looks like Apache mod_perl is not configured correctly -
>>> mod_headers.so is an Apache module, not part of the Ensembl codebase, so
>>> the server shouldn't be looking in ensembl/modules on startup. Did you
>>> follow our instructions for compiling Apache, or use the version that came
>>> with your OS?
>>>
>>> Cheers
>>>
>>> Anne
>>>
>>>
>>>
>>> On 6 Nov 2013, at 20:45, Naveen G <naveeng at utexas.edu> wrote:
>>>
>>> > Hi,
>>> >
>>> > I am in the middle of mirroring the ensembl website. I installed all
>>> the required softwares and when I tried to start the server with ensembl as
>>> the server-root, I get the below error. I have filed a request(Ensembl
>>> #362309) for assistance but haven't heard back.
>>> >
>>> > httpd: Syntax error on line 53 of ../../ensembl/conf/httpd.conf:
>>> Cannot load ../../ensembl/modules/mod_headers.so into server:
>>> ../../ensembl/modules/mod_headers.so: cannot open shared object file: No
>>> such file or directory
>>> >
>>> > The ensembl directory was pulled from the link provided in the
>>> documentation which is "cvs -d :pserver:cvsuser at cvs.sanger.
>>> > ac.uk:/cvsroot/ensembl co -r branch-ensembl-73 ensembl-api
>>> ensembl-website". Looks like it doesn't have the required modules. I am
>>> using the httpd version 2.2.25 and mod_perl 2.0.7. Could you please tell me
>>> if I am missing something here?
>>> >
>>> > Thanks,
>>> > Naveen.
>>> > _______________________________________________
>>> > Dev mailing list    Dev at ensembl.org
>>> > Posting guidelines and subscribe/unsubscribe info:
>>> http://lists.ensembl.org/mailman/listinfo/dev
>>> > Ensembl Blog: http://www.ensembl.info/
>>>
>>> Anne Parker
>>> Ensembl Web Production Manager
>>> http://www.ensembl.org
>>>
>>>
>>>
>>>
>>> _______________________________________________
>>> Dev mailing list    Dev at ensembl.org
>>> Posting guidelines and subscribe/unsubscribe info:
>>> http://lists.ensembl.org/mailman/listinfo/dev
>>> Ensembl Blog: http://www.ensembl.info/
>>>
>>
>>
> _______________________________________________
> Dev mailing list    Dev at ensembl.org
> Posting guidelines and subscribe/unsubscribe info:
> http://lists.ensembl.org/mailman/listinfo/dev
> Ensembl Blog: http://www.ensembl.info/
>
>
>  Anne Parker
> Ensembl Web Production Manager
> www.ensembl.org
>
>
>
>
> _______________________________________________
> Dev mailing list    Dev at ensembl.org
> Posting guidelines and subscribe/unsubscribe info:
> http://lists.ensembl.org/mailman/listinfo/dev
> Ensembl Blog: http://www.ensembl.info/
>
>
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