[ensembl-dev] update API issue

nconte at ebi.ac.uk nconte at ebi.ac.uk
Fri Nov 15 14:26:49 GMT 2013


Hi,
I have been updating my ensembl API versions from 71 to 73 today, and
reran a script to test it was working.
In my script I am excluding genes  Ids for haplotypes /  LRG /
pseudoautomosal
or  assembly patches/fixes regions. I am using this test/method to exclude
them
(if $gene->slice->is_reference)

I am now getting genes mapping on HSCHR6_MHC_MCF_CTG1 which were excluded
on my last version of the API. Is the slice->is_reference deprecated?
Thanks
Nathalie






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