[ensembl-dev] VEP feature request - different plugin and cache folder locations

[Will McLaren]

That one is always the latest branch.

Head is our "bleeding-edge" code that gets branched every Ensembl release -
you should only use head if you know what you're doing, or in the case of
the forking stuff, if I tell you to :-)

Will


On 15 May 2013 13:15, Duarte Molha <duartemolha at gmail.com> wrote:

> Thanks...
>
> It was right in front of my face but I wasn't able to see it :)
>
> However, please correct me if I am wrong... but the
>
> http://www.ensembl.org/info/docs/variation/vep/vep_script.html#top
>
> Version is the one in head right? So that one would not have the new
> arguments right?
>
> Thanks
>
> Duarte
>
>
> =========================
>      Duarte Miguel Paulo Molha
>          http://about.me/duarte
> =========================
>
>
> On Wed, May 15, 2013 at 1:12 PM, Will McLaren <wm2 at ebi.ac.uk> wrote:
>
>> You just need the script from the ensembl-tools module.
>>
>> You could just download from the web page too:
>>
>> http://www.ensembl.org/info/docs/variation/vep/vep_script.html#top
>>
>> Will
>>
>>
>> On 15 May 2013 12:56, Duarte Molha <duartemolha at gmail.com> wrote:
>>
>>> I am terrible sorry ... But I just downloaded you CSV repository. Where
>>> in the branch 71 can I checkout your code?
>>>
>>> Thanks
>>>
>>> Duarte
>>>
>>> =========================
>>>      Duarte Miguel Paulo Molha
>>>          http://about.me/duarte
>>> =========================
>>>
>>>
>>> On Wed, May 15, 2013 at 12:26 PM, Will McLaren <wm2 at ebi.ac.uk> wrote:
>>>
>>>> --dir_cache and --dir_plugins are now available on branch 71.
>>>>
>>>> Will
>>>>
>>>>
>>>> On 15 May 2013 12:13, LAW Andy <andy.law at roslin.ed.ac.uk> wrote:
>>>>
>>>>>
>>>>> On 15 May 2013, at 12:08, Duarte Molha <duartemolha at gmail.com> wrote:
>>>>>
>>>>> >
>>>>> > I would not call myself "normal" but I agree with Andy Law that
>>>>> users would appreciate the option :)
>>>>> >
>>>>>
>>>>> No-one that knows me thinks *I'm* normal, but when a discussion
>>>>> descends into suggesting esoteric manipulation of environment variables
>>>>> relating to Perl installations as an acceptable alternative to introducing
>>>>> simple and logical command-line arguments into a script, I think a bit of a
>>>>> reality check is perhaps in order.
>>>>>
>>>>>
>>>>> Later,
>>>>>
>>>>> Andy
>>>>> --------
>>>>> Yada, yada, yada...
>>>>>
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