[ensembl-dev] VEP feature request - different plugin and cache folder locations

Will McLaren wm2 at ebi.ac.uk
Wed May 15 13:12:55 BST 2013


You just need the script from the ensembl-tools module.

You could just download from the web page too:

http://www.ensembl.org/info/docs/variation/vep/vep_script.html#top

Will


On 15 May 2013 12:56, Duarte Molha <duartemolha at gmail.com> wrote:

> I am terrible sorry ... But I just downloaded you CSV repository. Where in
> the branch 71 can I checkout your code?
>
> Thanks
>
> Duarte
>
> =========================
>      Duarte Miguel Paulo Molha
>          http://about.me/duarte
> =========================
>
>
> On Wed, May 15, 2013 at 12:26 PM, Will McLaren <wm2 at ebi.ac.uk> wrote:
>
>> --dir_cache and --dir_plugins are now available on branch 71.
>>
>> Will
>>
>>
>> On 15 May 2013 12:13, LAW Andy <andy.law at roslin.ed.ac.uk> wrote:
>>
>>>
>>> On 15 May 2013, at 12:08, Duarte Molha <duartemolha at gmail.com> wrote:
>>>
>>> >
>>> > I would not call myself "normal" but I agree with Andy Law that users
>>> would appreciate the option :)
>>> >
>>>
>>> No-one that knows me thinks *I'm* normal, but when a discussion descends
>>> into suggesting esoteric manipulation of environment variables relating to
>>> Perl installations as an acceptable alternative to introducing simple and
>>> logical command-line arguments into a script, I think a bit of a reality
>>> check is perhaps in order.
>>>
>>>
>>> Later,
>>>
>>> Andy
>>> --------
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