[ensembl-dev] Out of memory with Storable/BLAST

Youens-Clark, Ken kclark at cshl.edu
Fri May 10 17:18:14 BST 2013


I continue to vainly struggle to set up Gramene.org's BLAST server with v70 of the Ensembl code.  Now I'm getting this error:

Out of memory!
Callback called exit at /usr/local/lib/perl5/5.8.9/x86_64-linux/Storable.pm line 418.

I upgraded to v2.39, dropped and recreated the database, dropped and recreated the "tmp" directory, restarted the server, and I still get this.  I do see I'm running a pretty old Perl.  Should I attempt an upgrade of that first?

--
Ken Youens-Clark
kclark at cshl.edu
Ware Lab/CSHL/USDA-ARS







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