[ensembl-dev] VEP - method to verify the result

binit treesa binit.treesa at gmail.com
Wed Mar 6 06:53:02 GMT 2013


Hi Will McLaren,

I have 300+ varaiant files, each file contains 10 Lakhs of variants. So I
automated the VEP run on these files with a small script and it will launch
7 VEP run in parallel. Last day, the entire VEP run got finished. Usually I
get the result file with the size > 1000 MB. But this time some of files
(nearly 10 ) are of the size 800 / 700 MB. I suspect the VEP run on these
file is not completed.

Is there any way to verify these result so as to ensure the run is
successful.

Thanks in advance,
Treesa Binit
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20130306/2ca38321/attachment.html>


More information about the Dev mailing list