[ensembl-dev] Lost information in new biomart release
Beat Wolf
wolf at fryx.ch
Tue Jun 18 19:13:40 BST 2013
I also couldn't get the 71 archive to work. The url should be
http://apr2013.archive.ensembl.org/biomart/
right?
The changelog doesn't seem to indicate that the functionality i need was removed.
Also, in the changelog of Ensembl Genes 72 there is this entry:
-Reinstated PolyPhen prediction and score filters and attributes
That should go into Ensembl Variation 72 i guess. Thank you for fixing that by the
way, i reported that when 71 got online.
I hope the functionality lost this time can be recovered before the 73 release in a few
months... quite some code depends on it. If at least the archive would work that would
be perfect.
Thank you for your help
Greetings
Beat Wolf
On Tuesday 18 June 2013 19.38:37 Beat Wolf wrote:
> Hello,
>
> i have a problem. In the new biomart update that just got out, i can't find
> a way to get the following information on an exon:
>
> 5_utr_start
> 5_utr_end
> 3_utr_start
> 3_utr_end
> genomic_coding_end
> cdna_coding_start
> cds_start
> cds_end
>
> Did it move to some place else? Where can i find this information? Thank you
> for your help!
>
> Best regards
>
> Beat Wolf
>
> _______________________________________________
> Dev mailing list Dev at ensembl.org
> Posting guidelines and subscribe/unsubscribe info:
> http://lists.ensembl.org/mailman/listinfo/dev Ensembl Blog:
> http://www.ensembl.info/
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20130618/245c5dd5/attachment.html>
More information about the Dev
mailing list