[ensembl-dev] cannot find Bio/EnsEMBL/GlyphSet/stranded_contig.pm

[Sharon Wei]

Thanks a lot.

Sharon


On 1/10/13 4:12 PM, ek wrote:
> in
> eg-plugins/plants/modules/EnsEMBL/Web/ImageConfig/MultiBottom.pm
>
>
> replace stranded_contig with contig
>
> I'll put the fix to the eg code tomorrow
>
> On 2013-01-10 20:22, Sharon Wei wrote:
>> Hi All,
>>
>> On our ensembl genome browser server, there is an error message
>> complaining a missing module.
>>
>> "Sanger Graphics Root: Can't locate
>> Bio/EnsEMBL/GlyphSet/stranded_contig.pm in @INC (@INC contains:
>> /usr/local/gramene/lib/perl
>> /usr/local/ensembl-live/gramene-live/ensembl-plugins/gramene/modules
>> /usr/local/ensembl-live/public-plugins/mart/modules
>> /usr/local/ensembl-live/eg-plugins/plants/modules
>> /usr/local/ensembl-live/eg-plugins/common/modules
>> /usr/local/ensembl-live/ensembl/modules
>> /usr/local/ensembl-live/ensembl-compara/modules
>> /usr/local/ensembl-live/ensembl-draw/modules
>> /usr/local/ensembl-live/ensembl-variation/modules
>> /usr/local/ensembl-live/ensembl-functgenomics/modules
>> /usr/local/ensembl-live/ensembl-external/modules
>> /usr/local/ensembl-live/biomart-perl/lib
>> /usr/local/ensembl-live/bioperl-live /usr/local/ensembl-live/modules
>> /usr/local/ensembl-live/conf/
>> /usr/local/lib/perl5/site_perl/5.14.0/x86_64-linux
>> /usr/local/lib/perl5/site_perl/5.14.0
>> /usr/local/lib/perl5/5.14.0/x86_64-linux /usr/local/lib/perl5/5.14.0
>> /usr/local/lib/perl5/site_perl/5.12.2
>> /usr/local/lib/perl5/site_perl/5.8.8 /usr/local/lib/perl5/site_perl .
>> /usr/local/apache2) at (eval 1161) line 2."
>>
>> I cannot find it any where not in ensembl-draw nor in the eg-plugins.
>>
>> Could anyone help?
>>
>> Thanks.
>>
>>
>> Sharon