[ensembl-dev] Getting import_vcf.pl working

Tchourbanov, Alexander Y - (atchourb) atchourb at email.arizona.edu
Thu Feb 28 01:38:03 GMT 2013


Andy,

Thanks for the response, I have managed to start interacting with the database.
Immediately, I have another problem - the versions conflict.

-------------------- WARNING ----------------------
MSG: Please insert meta_key 'schema_version' in meta table at variation db.

FILE: Variation/DBSQL/MetaContainer.pm LINE: 74
CALLED BY: Bio/EnsEMBL/Registry.pm  LINE: 2336
Ensembl API version = 65
---------------------------------------------------

I am pretty sure I have downloaded the latest API, nevertheless it informs me that this is version 65, not 70. Where do I get version 70 API, or should I downgrade my schema to version 65 instead?

Thanks,

Alexander




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