[ensembl-dev] Typo in VEP documentation
Duarte Molha
Duarte.Molha at ogt.com
Fri Dec 6 13:41:31 GMT 2013
Dear developers
I found a typo in the documentation of VEP at: http://www.ensembl.org/info/docs/tools/vep/script/vep_cache.html#pre
wget ftp://ftp.ensembl.org/pub/release-74/fasta/homo_sapiens/dna/Homo_sapiens.GRCh27.74.dna.primary_assembly.fa.gz
gzip -d Homo_sapiens.GRCh27.74.dna.primary_assembly.fa.gz
perl variant_effect_predictor.pl -i input.vcf --offline --hgvs --fasta Homo_sapiens.GRCh27.74.dna.primary_assembly.fa
I believe the fasta file should be : Homo_sapiens.GRCh37.74.dna.primary_assembly.fa.gz
Best regards
Duarte Molha
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