[ensembl-dev] gene description

yin huang abelhuangyin at gmail.com
Tue May 15 05:56:41 BST 2012


Hi,all

I find these error basically appear in species 'Fruitfly' in ensembl
release 67 download from
ftp://ftp.ebi.ac.uk/pub/software/ensembl/EBeyeXML/ensembl/ .Hope to see as
soon as possible to correct data.

I find the same error in gene description as follow:

homogentisate 1%2c2-dioxygenase
absent%2c small%2c or homeotic discs 1
jumonji%2c at rich interactive domain 2
selenide%2cwater dikinase
modifier of rpr and grim%2c ubiquitously expressed
atp synthase%2c subunit b
inositol 1%2c4%2c5-triphosphate kinase 1
gdp-mannose 4%2c6-dehydratase
gdp-4-keto-6-deoxy-d-mannose 3%2c5-epimerase/4-reductase
atp synthase%2c subunit d
scavenger receptor class c%2c type iii
breast cancer 2%2c early onset homolog
absent%2c small%2c or homeotic discs 2
alpha1%2c6-fucosyltransferase
scavenger receptor class c%2c type ii
na%2ck-atpase interacting
inositol 1%2c4%2c5-triphosphate kinase 2
inositol 1%2c4%2c5%2c-tris-phosphate receptor
fructose-1%2c6-bisphosphatase
forkhead box%2c sub-group o
scavenger receptor class c%2c type i
scavenger receptor class c%2c type iv


2012/5/15 Javier Herrero <jherrero at ebi.ac.uk>

> **
>
> Hi Yin
>
> This seems to be an error: http://flybase.org/reports/FBgn0050169.html
>
> I guess there is a problem with the parser, thank you for reporting this.
>
> Javier
>
> Sent from my Kindle Fire
>
>
> ------------------------------
> *From:* yin huang <abelhuangyin at gmail.com>
> *Sent:* Tue May 15 04:54:03 GMT+01:00 2012
> *To:* dev at ensembl.org
> *Subject:* [ensembl-dev] gene description
>
> Hi,all
>     I find that some gene description has char '%'。
>     follow url:
>
> http://www.ensembl.org/Drosophila_melanogaster/Search/Details?species=Drosophila_melanogaster;idx=Gene;end=1;q=breast%20cancer%202%252c%20early%20onset%20homolog
>
>     error or correct?
>     who can help me? Thank you very much.
>
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