[ensembl-dev] How to link to Compara results?

Javier Herrero jherrero at ebi.ac.uk
Tue Mar 13 17:28:52 GMT 2012


Hi Dan, Ken

The only species-independent page we have at the moment is the GeneTree, 
given a gene tree stable id. For instance:
http://www.ensembl.org/Multi/GeneTree?gt=ENSGT00390000003602

Maybe you could use that one.

I hope this helps

Javier

On 13/03/12 17:22, Dan Bolser wrote:
> Sorry, when I sent this email the first time, I forgot to give it a
> sane subject.
>
>
> On 12 March 2012 22:16, Dan Bolser<dbolser at ebi.ac.uk>  wrote:
>> On 9 March 2012 17:29, Youens-Clark, Ken<kclark at cshl.edu>  wrote:
>>
>>> I have another question regarding how to link to Compara results.  E.g., we'd like to index gene IDs from species we don't hold but that are used in the Compara build.  Since we don't have the species, we can't link to a Gene Summary page.  I'd like to be able to link to the some sort of species-independent Compara result details page.  Is there such a place to send our users?
>> Can anyone from compara answer this question?
>>
>> I hope this is the right list, I didn't see a compara specific one.
>>
>>
>> Cheers,
>> Dan.
>>
>>
>>> --
>>> Ken Youens-Clark
>>> kclark at cshl.edu
>>> Ware Lab/CSHL/USDA-ARS
>>>
> _______________________________________________
> Dev mailing list    Dev at ensembl.org
> List admin (including subscribe/unsubscribe): http://lists.ensembl.org/mailman/listinfo/dev
> Ensembl Blog: http://www.ensembl.info/
>

-- 
Javier Herrero, PhD
Ensembl Coordinator and Ensembl Compara Project Leader
European Bioinformatics Institute (EMBL-EBI)
Wellcome Trust Genome Campus, Hinxton
Cambridge - CB10 1SD - UK





More information about the Dev mailing list