[ensembl-dev] Fw: variant effect predictor script +Help

Neeba Sebastian neeba.sebastian at calpinetech.com
Wed Jul 11 09:10:25 BST 2012


Hi Team

I am Using Variant Effect Predictor standalone script .

I am trying to add HGVS notation to  the variants in vcf / or in default format.

Is there any default argument or method to represents the structural variants in HGVS
 
-- Thanks & Regards,

Neeba Maria Sebastian




----- Forwarded Message -----
From: Neeba Sebastian <neeba.sebastian at calpinetech.com>
To: "dev at ensembl.org" <dev at ensembl.org> 
Sent: Wednesday, July 11, 2012 1:35 PM
Subject: variant effect predictor script +Help
 

Hi Team

I am Using Variant Effect Predictor standalone script .

I am trying to add HGVS notation to  the variants in vcf / or in default format.

Is there any default argument or method to represents the structural variants in HGVS
 
-- Thanks & Regards,

Neeba Maria Sebastian
Software Test Engineer
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20120711/ff107873/attachment.html>


More information about the Dev mailing list