[ensembl-dev] protein tree id and tagvalue

[Moretti Sébastien]

There are no "fake" trees with 1 or 2 sequences only ?

> All the internal nodes should have those tags.
> Leaves can only have one tag: "lost_taxon_id". It contains the list of
> taxa that have lost the gene on the terminal branch.
>
> Regards,
> Matthieu
>
> On Thu 05 Jul 2012 12:54:11 BST, Moretti Sébastien wrote:
>>> Nice to hear that :)
>>>
>>> What do you mean by "has_tag() == false" ? has_tag is supposed to have
>>> one argument: the tag name to be tested.
>>> And are you speaking of node tags (from a GeneTreeNode object) ? or
>>> tree-wide tags (from a GeneTree object) ?
>>
>> I speak about GeneTreeNode objects.
>> Some trees, or nodes in trees, do not have has_tag('taxon_name') or
>> has_tag('node_type').
-- 
Sébastien Moretti
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