[ensembl-dev] protein tree id and tagvalue

[Matthieu Muffato]

All the internal nodes should have those tags.
Leaves can only have one tag: "lost_taxon_id". It contains the list of 
taxa that have lost the gene on the terminal branch.

Regards,
Matthieu

On Thu 05 Jul 2012 12:54:11 BST, Moretti Sébastien wrote:
>> Nice to hear that :)
>>
>> What do you mean by "has_tag() == false" ? has_tag is supposed to have
>> one argument: the tag name to be tested.
>> And are you speaking of node tags (from a GeneTreeNode object) ? or
>> tree-wide tags (from a GeneTree object) ?
>
> I speak about GeneTreeNode objects.
> Some trees, or nodes in trees, do not have has_tag('taxon_name') or
> has_tag('node_type').
>